BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C10SP1|AL426500
(831 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1618 0.0
>3x_Contig1766
Length = 23951
Score = 1618 bits (816), Expect = 0.0
Identities = 830/832 (99%), Gaps = 2/832 (0%)
Strand = Plus / Minus
Query: 1 atcaataacactagccaattggtcatcagtcatttggtccagcttatcacctgaaagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18513 atcaataacactagccaattggtcatcagtcatttggtccagcttatcacctgaaagcac 18454
Query: 61 actgtattcagggttgatgacaggaattccaatttgtctagcaatactaacagcagtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18453 actgtattcagggttgatgacaggaattccaatttgtctagcaatactaacagcagtgtt 18394
Query: 121 ttcagcatcacctgtgatcataataacatgtacgctaccttggagtagttcttcaatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18393 ttcagcatcacctgtgatcataataacatgtacgctaccttggagtagttcttcaatggc 18334
Query: 181 actgcggactgtcggcctaggtggatcattcatagcaattagaccagtaaatgttaagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18333 actgcggactgtcggcctaggtggatcattcatagcaattagaccagtaaatgttaagcc 18274
Query: 241 ttcaaccatgtcttcattgaattctttgtcaccatgggtggcgctcacctccagctccgc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 18273 ttcaaccatgtcttcattgaattctttgtcaccatgggtggcgctcacctccag-tccgc 18215
Query: 301 aaaagcaagtgtacgaagtccttcagaagccagtgcaacagctgcatcgttaatgatgg- 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18214 aaaagcaagtgtacgaagtccttcagaagccagtgcaacagctgcatcgttaatgatggg 18155
Query: 360 ctttatcatttggtttcagcttatgcaccttcccgtctctgccaatgtagttgatggatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18154 ctttatcatttggtttcagcttatgcaccttcccgtctctgccaatgtagttgatggatt 18095
Query: 420 tctcaacaatcttttcgaaagcacctttcacgtatactaccactttatcattggcatcga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18094 tctcaacaatcttttcgaaagcacctttcacgtatactaccactttatcattggcatcga 18035
Query: 480 tagttttgacagccataaattttctcttcgaattgaaagggatttcgttaatcttgttga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18034 tagttttgacagccataaattttctcttcgaattgaaagggatttcgttaatcttgttga 17975
Query: 540 cggagtttctgcaatcatttataccaaaatgttgtaatgactctaagatggcaatatctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17974 cggagtttctgcaatcatttataccaaaatgttgtaatgactctaagatggcaatatctg 17915
Query: 600 ttggattaccaaggtatttaagatgttcctgggagtaggtcccattattgcaaatgttac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17914 ttggattaccaaggtatttaagatgttcctgggagtaggtcccattattgcaaatgttac 17855
Query: 660 cgattctcaaagtggtagcaacatcttgctccattttaatcggtctttctttcaccttag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17854 cgattctcaaagtggtagcaacatcttgctccattttaatcggtctttctttcaccttag 17795
Query: 720 ataatgccaaacaattagttttattttccatactgcccaaacaccaaatctttgaaacag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17794 ataatgccaaacaattagttttattttccatactgcccaaacaccaaatctttgaaacag 17735
Query: 780 tcatatgatttgcggtcaaagtaccagtcttatcagaacaaataacgtttac 831
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17734 tcatatgatttgcggtcaaagtaccagtcttatcagaacaaataacgtttac 17683
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6174
Number of Sequences: 1807
Number of extensions: 6174
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 831
length of database: 10,358,551
effective HSP length: 16
effective length of query: 815
effective length of database: 10,329,639
effective search space: 8418655785
effective search space used: 8418655785
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)